Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015929841.1_cds_XP_016477048.1_68823
CDS Infomation	[gene=LOC107798549] [db_xref=GeneID:107798549] [protein=switch 2-like isoform X2] [protein_id=XP_016477048.1] [location=complement(join(14397..14428,14771..15029,15128..15403,15593..15719,16720..16967,17664..18588,18835..18941,20026..20421))] [gbkey=CDS]
Sequence	ATGTCTTGGAACAGCTTCAAGGAGACACTCAAGCCCTGCACTACAATTCAATCATCTTTC TCACAATCTTCTTCAATAAGTTCTTACAATTTCGACACAAATTCTGTAAACCCTAGAAAA CCCCCTAAATCTTCTTTGTCCCAGCAACTTCTACGCCTCGAAGATCGTTCTTCTTTGCCT CAAACCCAACCACCACAAACTCCCAATAAGCAGAACCATTTTGATTTGAAAAGCAAATAT GAAAAATCAGAGGAGGAGGAAGAAGAAGGAGAAGAAGAAGAAGAAGAAAAGCCCGTTGGG TTTGGGAGGCCCAAATTGGATCCTTTATTGCTAAATCAAACAGGACCTTACGAGCCTTTG GTTCTGTCTTCATCGGGTCAAAAGCCCGTTGTTCAGGTTCCAGCATCTATAAACTGTAGG CTTTTGGAGCATCAACGAGCAGGAGTGAAATTTTTGTATAGCTTGTATCAGAATAATCAT GGAGGAGTTCTTGGAGATGATATGGGACTTGGTAAAACCATCCAAAGCATTGCATTCTTA GCTGCTGTATTTGGTAAGGATGGAGACTTACCTGAATCAACAGTCTCGAAGGAACACCCA AGAACAAGGGGCCCTGTACTAATAGTTTGTCCCTCTTCTTTGATCCACAACTGGGTAAAT GAGTTTTCCAAGTGGGCAACATTTAGTGTTTGCATTTATCACGGGCCAAACCGTGATTTA ATGATTGACAAACTAGAAGCACGTGGAGTGGAGATACTTATAACCAGTTTTGATACATAC AGAATCCATGGACACATTTTATCAGATGTTGATTGGGAGATTGTGATTATTGATGAGGCT CATCGGCTTAAGAATGAGAAATCAAAACTGTACAAGGCATGTTTAGCAATTAAGACCCTA AAACGTTATGGTCTTACAGGAACAATAATGCAGAATAAATTAATGGAATTGTTCAACCTG TTCGACTGGGTGATACCCGGTTGCTTGGGGACACGTGAACACTTCCGAGAATTTTACGAT GAGCCCCTTAAACATGGTCAGCGATCAAGTGCTCCAGATAGATTTGTTCGAGTTGCTGAT GAGCGAAAACAGCACTTAGTATCAGTTCTGCACAAATATTTGTTAAGAAGGATAAAGGAG GAAACTATTGGACATCTCATGTTGGGGAAGGAAGATAATGTTGTATTTTGTGCAATGAGT GAACTGCAAAAACGGGTTTATCAGAGAATGCTACAGTTACCTGAGGTACGATGCCTTATC AATAAGGATCTCCCTTGTAGTTGTGGAAGCCCTCTCAAGCAAGTCGAATGTTGCAGAAGG ACGGTTCCAGATGGTATCATCTGGTCTTACCTTCACAGGGACAATCCAGATGGTTGTGAT TCATGCCCTTATTGTGTAGTTCTTCCTTGTCTCATGAAGCTCCAGCAGATAAGCAATCAC TTGGAGCTTATCAAGCCTAATCCAAGGGATGATCCAGATAAACAGAGAAAAGATGCAGAA TTTGCTGATGCTGTATTTGGTAAGGACATTGATTTGGTAGGAGGGCATACTCAGAATAAG AGTTTCTTGGGCTTAAGTAATGTTGAACATTGCGGGAAAATGAGAGCATTGGAGAAACTA ATGTCCTCTTGGGTTTCACAAGGTGACAAGATTCTTCTTTTCAGCTATTCTGTAAGGATG CTGGACATACTTGAGAAATTTATTATACGCAAAGGCTATGGCTTTTCAAGGCTTGATGGT TCCACCCCAACTGGCCTGCGCCAGTCTCTAGTCGACGACTTCAACTCTAGTCCTAGCAAA CAGGTGTTCCTTATATCAACAAAAGCTGGTGGACTTGGCCTTAACCTCGTTAGTGCAAAT CGTGTAGTGATATTTGATCCAAATTGGAATCCTGCCCAAGATTTGCAGGCCCAGGACAGA TCATTCCGATTTGGACAGAGGCGGCATGTTGTTGTTTTCCGCCTACTTGCGGCTGGTTCT CTTGAAGAACTTGTTTACACTCGTCAGGTCTACAAACAGCAGTTATCAAACATTGCTGTC TCTGGAAAAATGGAAAAACGCTATTTCGAGGGAGTTCAGGATTGTAAGGAGTTTCAAGGG GAGCTATTCGGTATCTGCAATCTTTTCAGAGATCTATCTGACAAACTCTTCACAAGTGAG ATCATTGAATTACATGAAAAGAAGAGAAAGGAAGATGGTACTCATTCAAAACAGGATTTG AGTGGGATGTATTTTGTTCCTGAGAAAGAAATAACTACAGCATCTTTGGTGGCACCTGAA AGCAGTAAACATAAAGAAGATGAGGGCACAGCAGTTGCTCCAATGCTTGAACACCTCGCA ATATTGAAGTTCTTTCTTCACCTCAGTTAA

Peptide Sequence

PEP ID	XP_016477048.1
PEP Infomation	PREDICTED: switch 2-like isoform X2 [Nicotiana tabacum]
Sequence	MSWNSFKETLKPCTTIQSSFSQSSSISSYNFDTNSVNPRKPPKSSLSQQLLRLEDRSSLP QTQPPQTPNKQNHFDLKSKYEKSEEEEEEGEEEEEEKPVGFGRPKLDPLLLNQTGPYEPL VLSSSGQKPVVQVPASINCRLLEHQRAGVKFLYSLYQNNHGGVLGDDMGLGKTIQSIAFL AAVFGKDGDLPESTVSKEHPRTRGPVLIVCPSSLIHNWVNEFSKWATFSVCIYHGPNRDL MIDKLEARGVEILITSFDTYRIHGHILSDVDWEIVIIDEAHRLKNEKSKLYKACLAIKTL KRYGLTGTIMQNKLMELFNLFDWVIPGCLGTREHFREFYDEPLKHGQRSSAPDRFVRVAD ERKQHLVSVLHKYLLRRIKEETIGHLMLGKEDNVVFCAMSELQKRVYQRMLQLPEVRCLI NKDLPCSCGSPLKQVECCRRTVPDGIIWSYLHRDNPDGCDSCPYCVVLPCLMKLQQISNH LELIKPNPRDDPDKQRKDAEFADAVFGKDIDLVGGHTQNKSFLGLSNVEHCGKMRALEKL MSSWVSQGDKILLFSYSVRMLDILEKFIIRKGYGFSRLDGSTPTGLRQSLVDDFNSSPSK QVFLISTKAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQRRHVVVFRLLAAGS LEELVYTRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFTSE IIELHEKKRKEDGTHSKQDLSGMYFVPEKEITTASLVAPESSKHKEDEGTAVAPMLEHLA ILKFFLHLS

Transcript Sequence

Gene sequence data has not been registered.